Difference between revisions of "Downloads"
From Phaserwiki
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Installation from source is required to call Phaser from Python | Installation from source is required to call Phaser from Python | ||
− | + | __NOTOC__ | |
− | + | ==Phaser-2.5.0 <span style="color:darkorange">''Under Construction''</span>== | |
*Download with Phenix Package → [http://www.phenix-online.org/download/nightly_builds.cgi?admin=1| Nightly Builds] | *Download with Phenix Package → [http://www.phenix-online.org/download/nightly_builds.cgi?admin=1| Nightly Builds] | ||
**Precompiled executables and source installations are available | **Precompiled executables and source installations are available | ||
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*Download with Test release of ccp4 v6.3.0. It is tagged as 6.2.993 and the tarballs are available on the ftp server ftp.ccp4.ac.uk/ccp4/6.2.993. <span style="color:darkorange">''Warning: Known Bugs in this version (4th April 2012)''</span> | *Download with Test release of ccp4 v6.3.0. It is tagged as 6.2.993 and the tarballs are available on the ftp server ftp.ccp4.ac.uk/ccp4/6.2.993. <span style="color:darkorange">''Warning: Known Bugs in this version (4th April 2012)''</span> | ||
− | ==CCP4i== | + | ==Phaser-2.5.0 CCP4i== |
− | If you're installing under Windows, the ccp4i files are included in the installation wizard. | + | =====Windows===== |
+ | *If you're installing under Windows, the ccp4i files are included in the installation wizard. | ||
+ | =====Linux/MacOS===== | ||
+ | *The ccp4i files for phaser are included in the phaser source code distribution. | ||
− | + | ==Phaser-2.3.0== | |
− | + | *Download with CCP4 6.2 Package → [http://www.ccp4.ac.uk/download/ CCP4] | |
− | + | ==Phaser-2.3.0 CCP4i== | |
+ | =====Windows===== | ||
+ | *If you're installing under Windows, the ccp4i files are included in the installation wizard | ||
+ | =====Linux/MacOS===== | ||
* Download CCP4 interface for Phaser_MR [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_MR_3.tar.gz Phaser_MR_3.tar.gz] | * Download CCP4 interface for Phaser_MR [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_MR_3.tar.gz Phaser_MR_3.tar.gz] | ||
* Download CCP4 interface for Phaser_EP [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_EP_3.tar.gz Phaser_EP_3.tar.gz] | * Download CCP4 interface for Phaser_EP [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_EP_3.tar.gz Phaser_EP_3.tar.gz] | ||
* Download CCP4 interface for Phaser_NMA [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_NMA_3.tar.gz Phaser_NMA_3.tar.gz] | * Download CCP4 interface for Phaser_NMA [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_NMA_3.tar.gz Phaser_NMA_3.tar.gz] | ||
− | + | *To install new Phaser GUI | |
− | + | *# Make sure you have '''write permission''' for the directory where ccp4 is installed | |
− | # Make sure you have '''write permission''' for the directory where ccp4 is installed | + | *# Start the CCP4 GUI (by entering "ccp4i" at the command line) |
− | # Start the CCP4 GUI (by entering "ccp4i" at the command line) | + | *# Select the "System Administration" pull-down on the right-hand side of the CCP4 gui |
− | # Select the "System Administration" pull-down on the right-hand side of the CCP4 gui | + | *# Select "Install Tasks" |
− | # Select "Install Tasks" | + | *# In the new window, in the "Task archive" box, enter <path-to>/Phaser_MR_3.tar.gz. Note that the file '''must''' be called Phaser_MR_3.tar.gz − '''Do not rename it''' |
− | # In the new window, in the "Task archive" box, enter <path-to>/Phaser_MR_3.tar.gz. Note that the file '''must''' be called Phaser_MR_3.tar.gz − '''Do not rename it''' | + | *# The details of the Phaser gui installation will appear in the boxes |
− | # The details of the Phaser gui installation will appear in the boxes | + | *# Click "Apply" at the bottom of the window |
− | # Click "Apply" at the bottom of the window | + | *# Click "Accept" in the prompt box |
− | # Click "Accept" in the prompt box | + | *To uninstall previous Phaser GUI |
− | + | *# Make sure you have '''write permission''' for the directory where ccp4 is installed | |
− | + | *# Start the CCP4 GUI (by entering "ccp4i" at the command line) | |
− | # Make sure you have '''write permission''' for the directory where ccp4 is installed | + | *# Select the "System Administration" pull-down on the right-hand side of the CCP4 gui |
− | # Start the CCP4 GUI (by entering "ccp4i" at the command line) | + | *# Select "Install Tasks" |
− | # Select the "System Administration" pull-down on the right-hand side of the CCP4 gui | + | *# In the top pulldown, Select '''Run the Installation Manager to''' "uninstall an existing task" |
− | # Select "Install Tasks" | + | *# In the new Choose Task to Uninstall folder, choose "Phaser". ''If there is no task called Phaser, you have not installed the ccp4i GUI for Phaser manually.'' |
− | # In the top pulldown, Select '''Run the Installation Manager to''' "uninstall an existing task" | + | *# The details of the Phaser gui installation will appear in the boxes |
− | # In the new Choose Task to Uninstall folder, choose "Phaser". ''If there is no task called Phaser, you have not installed the ccp4i GUI for Phaser manually.'' | + | *# Click "Apply" at the bottom of the window |
− | # The details of the Phaser gui installation will appear in the boxes | + | *# Click "Proceed" in the prompt box |
− | # Click "Apply" at the bottom of the window | + | *# Exit ccp4i |
− | # Click "Proceed" in the prompt box | + | *New GUI will not rerun jobs with old GUI |
− | # Exit ccp4i | + | **Keyword input has changed. You cannot (reliably) rerun old phaser jobs in the new |
− | |||
− | |||
− | Keyword input has changed. You cannot (reliably) rerun old phaser jobs in the new | ||
GUI (not backwardly compatible). | GUI (not backwardly compatible). |
Revision as of 23:38, 23 April 2012
Phaser is subject to licence conditions
Installation from source is required to call Phaser from Python
Phaser-2.5.0 Under Construction
- Download with Phenix Package → Nightly Builds
- Precompiled executables and source installations are available
- An Ubuntu Linux boot iso file is available from the Phenix website. Burn this file to a DVD and use it to boot your computer and run Phenix and Coot. More information on Phubuntu
- Download with Test release of ccp4 v6.3.0. It is tagged as 6.2.993 and the tarballs are available on the ftp server ftp.ccp4.ac.uk/ccp4/6.2.993. Warning: Known Bugs in this version (4th April 2012)
Phaser-2.5.0 CCP4i
Windows
- If you're installing under Windows, the ccp4i files are included in the installation wizard.
Linux/MacOS
- The ccp4i files for phaser are included in the phaser source code distribution.
Phaser-2.3.0
- Download with CCP4 6.2 Package → CCP4
Phaser-2.3.0 CCP4i
Windows
- If you're installing under Windows, the ccp4i files are included in the installation wizard
Linux/MacOS
- Download CCP4 interface for Phaser_MR Phaser_MR_3.tar.gz
- Download CCP4 interface for Phaser_EP Phaser_EP_3.tar.gz
- Download CCP4 interface for Phaser_NMA Phaser_NMA_3.tar.gz
- To install new Phaser GUI
- Make sure you have write permission for the directory where ccp4 is installed
- Start the CCP4 GUI (by entering "ccp4i" at the command line)
- Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
- Select "Install Tasks"
- In the new window, in the "Task archive" box, enter <path-to>/Phaser_MR_3.tar.gz. Note that the file must be called Phaser_MR_3.tar.gz − Do not rename it
- The details of the Phaser gui installation will appear in the boxes
- Click "Apply" at the bottom of the window
- Click "Accept" in the prompt box
- To uninstall previous Phaser GUI
- Make sure you have write permission for the directory where ccp4 is installed
- Start the CCP4 GUI (by entering "ccp4i" at the command line)
- Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
- Select "Install Tasks"
- In the top pulldown, Select Run the Installation Manager to "uninstall an existing task"
- In the new Choose Task to Uninstall folder, choose "Phaser". If there is no task called Phaser, you have not installed the ccp4i GUI for Phaser manually.
- The details of the Phaser gui installation will appear in the boxes
- Click "Apply" at the bottom of the window
- Click "Proceed" in the prompt box
- Exit ccp4i
- New GUI will not rerun jobs with old GUI
- Keyword input has changed. You cannot (reliably) rerun old phaser jobs in the new
GUI (not backwardly compatible).