Difference between revisions of "Phaser Crystallographic Software"
From Phaserwiki
(→Quicklinks) |
(→Documentation) |
||
| Line 5: | Line 5: | ||
==Documentation== | ==Documentation== | ||
Use the '''sidebar''' to navigate through the extensive documentation for Phaser. | Use the '''sidebar''' to navigate through the extensive documentation for Phaser. | ||
| − | + | ====Phaser-2.5.0==== | |
| − | + | *Download in Phenix Package → [http://www.phenix-online.org/download/nightly_builds.cgi?admin=1| Nightly Builds] <span style="color:darkorange">''Warning: Under Construction''</span> | |
| − | + | *Full Documentation → [[Phaser: Manual | Manual]] | |
| − | * | + | *Quicklinks to Keywords → [[Keywords | Keywords]] |
| + | ====Phaser-2.3.0==== | ||
| + | *Download in CCP4 6.2 Package → [http://www.ccp4.ac.uk/download/ CCP4] | ||
| + | *Full Documentation → [http://www-structmed.cimr.cam.ac.uk/phaser-2.3.0/index.html Manual] | ||
| + | *Quicklinks to Keywords → [http://www-structmed.cimr.cam.ac.uk/phaser-2.3.0/articles/k/e/y/Keywords.html Keywords] | ||
| + | *Bugfixes | ||
**Packing criteria incorrectly set for Phaser MR in CCP4i | **Packing criteria incorrectly set for Phaser MR in CCP4i | ||
*** ''A fixed interface is available from the ftp site and replaces the distributed interface in automated downloads from 3rd August 2011 onwards.'' → [http://www.ccp4.ac.uk/problems.php#6.2.0-phaser_MR CCP4-6.2.0 interface bug] | *** ''A fixed interface is available from the ftp site and replaces the distributed interface in automated downloads from 3rd August 2011 onwards.'' → [http://www.ccp4.ac.uk/problems.php#6.2.0-phaser_MR CCP4-6.2.0 interface bug] | ||
** Released 32 bit binary occasionally aborts on 64 bit Linux | ** Released 32 bit binary occasionally aborts on 64 bit Linux | ||
*** ''A fixed 32 bit binary is available from the ftp site and replaces the distributed binary in automated downloads from 19th October 2011 onwards.'' → [http://www.ccp4.ac.uk/problems.php#6.2.0-phaser CCP4-6.2.0 program bug]. | *** ''A fixed 32 bit binary is available from the ftp site and replaces the distributed binary in automated downloads from 19th October 2011 onwards.'' → [http://www.ccp4.ac.uk/problems.php#6.2.0-phaser CCP4-6.2.0 program bug]. | ||
| − | + | ====Phaser-2.1.4 ==== | |
| − | + | *Documentation for Phaser-2.1 → [http://www-structmed.cimr.cam.ac.uk/phaser_obsolete/documentation/phaser-2.1.html Manual] | |
| − | |||
| − | *Documentation for Phaser-2.1 | ||
==Referencing Phaser== | ==Referencing Phaser== | ||
Revision as of 18:09, 23 April 2012
Phaser is a program for phasing macromolecular crystal structures with maximum likelihood methods. It has been developed by Randy Read's group at the University of Cambridge and is available through the Phenix and CCP4 software suites, and directly from this site.
This website supersedes http://www-structmed.cimr.cam.ac.uk/phaser/ which is now obsolete (and redirects to this page). A copy of the obsolete website can be found at http://www-structmed.cimr.cam.ac.uk/phaser_obsolete/
Documentation
Use the sidebar to navigate through the extensive documentation for Phaser.
Phaser-2.5.0
- Download in Phenix Package → Nightly Builds Warning: Under Construction
- Full Documentation → Manual
- Quicklinks to Keywords → Keywords
Phaser-2.3.0
- Download in CCP4 6.2 Package → CCP4
- Full Documentation → Manual
- Quicklinks to Keywords → Keywords
- Bugfixes
- Packing criteria incorrectly set for Phaser MR in CCP4i
- A fixed interface is available from the ftp site and replaces the distributed interface in automated downloads from 3rd August 2011 onwards. → CCP4-6.2.0 interface bug
- Released 32 bit binary occasionally aborts on 64 bit Linux
- A fixed 32 bit binary is available from the ftp site and replaces the distributed binary in automated downloads from 19th October 2011 onwards. → CCP4-6.2.0 program bug.
- Packing criteria incorrectly set for Phaser MR in CCP4i
Phaser-2.1.4
- Documentation for Phaser-2.1 → Manual
Referencing Phaser
Citing crystallographic software in your paper is important for funding new software development. We rely on your citations to convince funding bodies that our software is being used.
If you solve a structure with Phaser, please cite
- Phaser crystallographic software pdf
- McCoy AJ, Grosse-Kunstleve RW, Adams PD, Winn MD, Storoni LC, Read RJ.
- J. Appl. Cryst. (2007). 40, 658-674.
