Difference between revisions of "Publications"
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==Citation== | ==Citation== | ||
− | ;Phaser crystallographic software [ | + | ;Phaser crystallographic software [https://scripts.iucr.org/cgi-bin/paper?he5368 '''J Appl Cryst'''] |
:McCoy AJ, Grosse-Kunstleve RW, Adams PD, Winn MD, Storoni LC, Read RJ | :McCoy AJ, Grosse-Kunstleve RW, Adams PD, Winn MD, Storoni LC, Read RJ | ||
:J. Appl. Cryst. (2007). 40, 658-674 | :J. Appl. Cryst. (2007). 40, 658-674 | ||
==Reviews== | ==Reviews== | ||
− | ;Using SAD data in Phaser [ | + | ;Using SAD data in Phaser [https://scripts.iucr.org/cgi-bin/paper?ba5159 '''Acta Cryst D'''] |
:Read RJ, McCoy AJ | :Read RJ, McCoy AJ | ||
:Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):338-344 | :Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):338-344 | ||
− | ;Experimental phasing<nowiki>:</nowiki> best practice and pitfalls [ | + | ;Experimental phasing<nowiki>:</nowiki> best practice and pitfalls [https://scripts.iucr.org/cgi-bin/paper?ba5142 '''Acta Cryst D'''] |
:McCoy AJ, Read RJ | :McCoy AJ, Read RJ | ||
:Acta Cryst. (2010) D66, 458-469. | :Acta Cryst. (2010) D66, 458-469. | ||
− | ;An introduction to molecular replacement [ | + | ;An introduction to molecular replacement [https://scripts.iucr.org/cgi-bin/paper?ba5108 '''Acta Cryst D'''] |
:Evans P, McCoy A | :Evans P, McCoy A | ||
:Acta Cryst.(2008) D64, 1-10. Epub 2007 Dec 5. | :Acta Cryst.(2008) D64, 1-10. Epub 2007 Dec 5. | ||
− | ;Solving structures of protein complexes by molecular replacement with Phaser [ | + | ;Solving structures of protein complexes by molecular replacement with Phaser [https://scripts.iucr.org/cgi-bin/paper?ba5095 '''Acta Cryst D'''] |
:McCoy AJ | :McCoy AJ | ||
:Acta Cryst. (2007). D63, 32-41 | :Acta Cryst. (2007). D63, 32-41 | ||
− | ;Liking Likelihood [ | + | ;Liking Likelihood [https://scripts.iucr.org/cgi-bin/paper?ba5064 '''Acta Cryst D'''] |
:McCoy AJ | :McCoy AJ | ||
:Acta Cryst. (2004). D60, 2169-2183 | :Acta Cryst. (2004). D60, 2169-2183 |
Latest revision as of 17:27, 6 December 2018
Citation
- Phaser crystallographic software J Appl Cryst
- McCoy AJ, Grosse-Kunstleve RW, Adams PD, Winn MD, Storoni LC, Read RJ
- J. Appl. Cryst. (2007). 40, 658-674
Reviews
- Using SAD data in Phaser Acta Cryst D
- Read RJ, McCoy AJ
- Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):338-344
- Experimental phasing: best practice and pitfalls Acta Cryst D
- McCoy AJ, Read RJ
- Acta Cryst. (2010) D66, 458-469.
- An introduction to molecular replacement Acta Cryst D
- Evans P, McCoy A
- Acta Cryst.(2008) D64, 1-10. Epub 2007 Dec 5.
- Solving structures of protein complexes by molecular replacement with Phaser Acta Cryst D
- McCoy AJ
- Acta Cryst. (2007). D63, 32-41
- Liking Likelihood Acta Cryst D
- McCoy AJ
- Acta Cryst. (2004). D60, 2169-2183
Primary Citations
- Gyre and gimble: a maximum-likelihood replacement for Patterson correlation refinement Acta Cryst D
- McCoy AJ, Oeffner RD, Millán, Sammito M, Usón, Read RJ
- Acta Cryst. (2018). D74, 279-289
- On the application of the expected log-likelihood gain to decision making in molecular replacement Acta Cryst D
- Oeffner RD, Afonine PV, Millán C, Sammito M, Usón I, Read RJ, McCoy AJ
- Acta Cryst. (2018). D74, 245-255
- Maximum-likelihood determination of anomalous substructures Acta Cryst D
- Read RJ and McCoy AJ
- Acta Cryst. (2018). D74, 89-105
- Ab initio solution of macromolecular crystal structures without direct methods PNAS
- McCoy AJ, Oeffner RD, Wrobel AG, Ojala JRM, Tryggvason K, Lohkamp B, Read RJ
- Proc. Natl. Acad. Sci. USA (2017). 114, 3637-3641
- A log-likelihood-gain intensity target for crystallographic phasing that accounts for experimental error Acta Cryst D
- Read RJ, McCoy AJ
- Acta Cryst. (2016). D72, 375-387
- Phaser.MRage: automated molecular replacement Acta Cryst D
- Bunkoczi G, Echols N, McCoy AJ, Oeffner RD, Adams PD, Read RJ
- Acta Cryst. (2013). D69, 2276-2286
- SCEDS: protein fragments for molecular replacement in Phaser Acta Cryst D
- McCoy AJ, Nicholls RA, Schneider TR
- Acta Cryst. (2013). D69, 2216-2225
- Improved estimates of coordinate error for molecular replacement Acta Cryst D
- Oeffner RD, Bunkocz G, McCoy AJ, Read RJ
- Acta Cryst. (2013). D69, 2209-2215
- Intensity statistics in the presence of translational non-crystallographic symmetry Acta Cryst D
- Read RJ, Adams PD, McCoy AJ
- Acta Cryst. (2013). D69, 176-183
- Improvement of molecular replacement models with Sculptor Acta Cryst D
- Bunkoczi G, Read RJ
- Acta Cryst. (2011). D67, 303-312
- Likelihood-enhanced fast translation functions Acta Cryst D
- McCoy AJ, Grosse-Kunstleve RW, Storoni LC, Read RJ
- Acta Cryst. (2005). D61, 458-464
- Simple algorithm for a maximum-likelihood SAD function Acta Cryst D
- McCoy AJ, Storoni LC, Read RJ
- Acta Cryst. (2004). D60, 1220-1228
- Likelihood-enhanced fast rotation functions Acta Cryst D pdf
- Storoni LC, McCoy AJ, Read RJ
- Acta Cryst. (2004). D60, 432-438
- Pushing the boundaries of molecular replacement with maximum likelihood Acta Cryst D
- Read RJ
- Acta Cryst. (2001). D57, 1373-1382