Difference between revisions of "Phaser Crystallographic Software"
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| − | Phaser is a program for phasing macromolecular crystal structures with maximum likelihood methods. It has been developed by Randy Read's group at the University of Cambridge and is available through the [http://www.phenix-online.org Phenix] and [http://www.ccp4.ac.uk CCP4] software suites | + | Phaser is a program for phasing macromolecular crystal structures with maximum likelihood methods. It has been developed by [[Developers | Randy Read's group]] at the [http://www.cimr.cam.ac.uk Cambridge Insitute for Medical Research] (CIMR) in the [http://ww.cam.ac.uk| University of Cambridge] and is available through the [http://www.phenix-online.org Phenix] and [http://www.ccp4.ac.uk CCP4] software suites. |
| − | This | + | This wiki supersedes http://www-structmed.cimr.cam.ac.uk/phaser/ which is now '''obsolete''' (and redirects to this page). A copy of the obsolete website can be found at http://www-structmed.cimr.cam.ac.uk/phaser_obsolete/ |
Use the '''sidebar''' to navigate through the extensive documentation for Phaser. | Use the '''sidebar''' to navigate through the extensive documentation for Phaser. | ||
Revision as of 08:27, 4 May 2012
Phaser is a program for phasing macromolecular crystal structures with maximum likelihood methods. It has been developed by Randy Read's group at the Cambridge Insitute for Medical Research (CIMR) in the University of Cambridge and is available through the Phenix and CCP4 software suites.
This wiki supersedes http://www-structmed.cimr.cam.ac.uk/phaser/ which is now obsolete (and redirects to this page). A copy of the obsolete website can be found at http://www-structmed.cimr.cam.ac.uk/phaser_obsolete/
Use the sidebar to navigate through the extensive documentation for Phaser.
Currently Supported Releases
Phaser-2.5.0 Under Construction
- Download with Phenix Package → Nightly Builds
- Full Documentation → Manual
- Quicklinks to Keywords → Keywords
Phaser-2.4.0
- Download with Phenix Latest Official Release (recommended) 1.7.3-928 (6 Dec 2011) → Phenix Downloads
- Full Documentation → Manual
- Quicklinks to Keywords → Keywords
- Bugfixes
- Heterogen atoms weren't carried through in PDB file in MR
- Packing function accepted cases where an ensemble with internal point group symmetry was on a special position
- Phaser-2.4.1available since 8th December 2011
Phaser-2.3.0
- Download with CCP4 6.2 Package → CCP4
- Full Documentation → Manual
- Quicklinks to Keywords → Keywords
- Bugfixes
- Packing criteria incorrectly set for Phaser MR in CCP4i
- A fixed interface is available from the ftp site and replaces the distributed interface in automated downloads from 3rd August 2011 onwards. → CCP4-6.2.0 interface bug
- Released 32 bit binary occasionally aborts on 64 bit Linux
- A fixed 32 bit binary is available from the ftp site and replaces the distributed binary in automated downloads from 19th October 2011 onwards. → CCP4-6.2.0 program bug.
- Packing criteria incorrectly set for Phaser MR in CCP4i
Referencing Phaser
Citing crystallographic software in your paper is important for funding new software development. We rely on your citations to convince funding bodies that our software is being used.
If you solve a structure with Phaser, please cite
- Phaser crystallographic software pdf
- McCoy AJ, Grosse-Kunstleve RW, Adams PD, Winn MD, Storoni LC, Read RJ.
- J. Appl. Cryst. (2007). 40, 658-674.
