Difference between revisions of "Downloads"

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<div style="margin-left: 25px; float: right;">__TOC__</div>
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<div style="margin-left: 25px; float: right;">__NOTOC__</div>
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Current release is '''Phaser-2.3''' → [[Phaser-2.3: Manual | Manual]]
 
  
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==Executables==
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Note that the use of Phaser is subject to the University of Cambridge's [[Licences | '''Licences''']]
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*Executables of the nightly builds are available at the [http://www.phenix-online.org Phenix] website. <span style="color:darkorange">''Warning: Under Construction''</span>
 
  
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==Phubuntu==
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;Phenix
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*An Ubuntu Linux boot iso file is available from the [http://www.phenix-online.org/download/ Phenix website]. Burn this file to a DVD and use it to boot your computer and run Phenix and Coot. [[Phenix-Ubuntu | More information on Phubuntu]]
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:Phenix [http://www.phenix-online.org/download/nightly_builds.cgi?admin=1| Nightly Builds]
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:Phenix [http://www.phenix-online.org/download/ Official Releases] (recommended)
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;CCP4
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:CCP4 [http://www.ccp4.ac.uk/dev/nightly/| Nightly Builds]  
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:CCP4 [http://www.ccp4.ac.uk/download.php Release] (recommended)
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:'' Official releases will be made available through the CCP4 update mechanism''
  
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==Source Code==
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==Phenix Installation==
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*Installation from source is required to call Phaser from Python
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Installation of Phaser with Phenix allows a choice of installation methods
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*To install the current Phaser from source, use the [http://www.phenix-online.org/downloads  Phenix] distribution of Phaser (free to academics).
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;Precompiled executables for selected platforms
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*Source installation of Phaser is also available through [http://www.ccp4.ac.uk CCP4]
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*Linux
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*Windows
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*Mac OS
  
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==CCP4i==
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;Source code installation
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If you're installing under Windows, the ccp4i files are included in the installation wizard.
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:Phaser can be compiled from source on the above platforms from the Phenix distribution
  
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To install the CCP4 GUI compatible with '''Phaser-2.3''' under linux or Mac OSX:
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==CCP4 Installation==
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* Download CCP4 interface for Phaser_MR [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_MR_3.tar.gz Phaser_MR_3.tar.gz]
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;Precompiled executables for selected platforms
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* Download CCP4 interface for Phaser_EP [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_EP_3.tar.gz  Phaser_EP_3.tar.gz]
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*Linux
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* Download CCP4 interface for Phaser_NMA [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_NMA_3.tar.gz  Phaser_NMA_3.tar.gz]
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*Windows
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*Mac OS
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===To install new Phaser GUI===
 
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# Make sure you have '''write permission''' for the directory where ccp4 is installed
 
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# Start the CCP4 GUI (by entering "ccp4i" at the command line)
 
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# Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
 
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# Select "Install Tasks"
 
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# In the new window, in the "Task archive" box, enter <path-to>/Phaser_MR_3.tar.gz.  Note that the file '''must''' be called Phaser_MR_3.tar.gz − '''Do not rename it'''
 
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# The details of the Phaser gui installation will appear in the boxes
 
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# Click "Apply" at the bottom of the window
 
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# Click "Accept" in the prompt box
 
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===To uninstall previous Phaser GUI===
 
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# Make sure you have '''write permission''' for the directory where ccp4 is installed
 
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# Start the CCP4 GUI (by entering "ccp4i" at the command line)
 
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# Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
 
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# Select "Install Tasks"
 
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# In the top pulldown, Select '''Run the Installation Manager to''' "uninstall an existing task"
 
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# In the new Choose Task to Uninstall folder, choose "Phaser". ''If there is no task called Phaser, you have not installed the ccp4i GUI for Phaser manually.''
 
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# The details of the Phaser gui installation will appear in the boxes
 
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# Click "Apply" at the bottom of the window
 
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# Click "Proceed" in the prompt box
 
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# Exit ccp4i
 
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===New GUI will not rerun jobs with old GUI===
 
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Keyword input has changed. You cannot (reliably) rerun old phaser jobs in the new
 
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GUI (not backwardly compatible).
 

Latest revision as of 18:47, 28 November 2016

Note that the use of Phaser is subject to the University of Cambridge's Licences

Phenix
Phenix Nightly Builds
Phenix Official Releases (recommended)
CCP4
CCP4 Nightly Builds
CCP4 Release (recommended)
Official releases will be made available through the CCP4 update mechanism

Phenix Installation

Installation of Phaser with Phenix allows a choice of installation methods

Precompiled executables for selected platforms
  • Linux
  • Windows
  • Mac OS
Source code installation
Phaser can be compiled from source on the above platforms from the Phenix distribution

CCP4 Installation

Precompiled executables for selected platforms
  • Linux
  • Windows
  • Mac OS
Retrieved from "https://www.phaser.cimr.cam.ac.uk/index.php?title=Downloads&oldid=2389"