Difference between revisions of "Downloads"

From Phaserwiki
(Phaser-2.5.0 Under Construction)
(Phaser-2.5.0 Under Construction)
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==Phaser-2.5.0 <span style="color:darkorange">''Under Construction''</span>==
 
==Phaser-2.5.0 <span style="color:darkorange">''Under Construction''</span>==
*Download with Phenix Package → [http://www.phenix-online.org/download/nightly_builds.cgi?admin=1| Nightly Builds]  
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;Phenix Installation
**Precompiled executables and source installations are available
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:Download with Phenix Package → [http://www.phenix-online.org/download/nightly_builds.cgi?admin=1| Nightly Builds]  
*An Ubuntu Linux boot iso file is available from the [http://www.phenix-online.org/download/ Phenix website]. Burn this file to a DVD and use it to boot your computer and run Phenix and Coot.
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:Precompiled executables and source installations are available
**[[Phenix-Ubuntu | More information on Phubuntu]]
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;CCP4 Installation
*Download with Test release of ccp4 v6.3.0. It is tagged as 6.2.993 and the tarballs are available on the ftp server ftp.ccp4.ac.uk/ccp4/6.2.993.  
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:Download with Test release of ccp4 v6.3.0. It is tagged as 6.2.993 and the tarballs are available on the ftp server ftp.ccp4.ac.uk/ccp4/6.2.993.  
**<span style="color:darkorange">''Warning: Known Bugs in this version (4th April 2012)''</span>
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:<span style="color:darkorange">''Warning: Known Bugs in this version (4th April 2012)''</span>
===Phaser-2.5.0 CCP4i===
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;Phubuntu
=====Windows=====
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:An Ubuntu Linux boot iso file is available from the [http://www.phenix-online.org/download/ Phenix website]. Burn this file to a DVD and use it to boot your computer and run Phenix and Coot.
*If you're installing under Windows, the ccp4i files are included in the installation wizard.  
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:[[Phenix-Ubuntu | More information on Phubuntu]]
=====Linux/MacOS=====
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;CCP4i
*The ccp4i files for phaser are included in the phaser source code distribution.
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:Windows
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::If you're installing under Windows, the ccp4i files are included in the installation wizard.  
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:Linux/MacOS
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::The ccp4i files for phaser are included in the phaser source code distribution.
  
 
==Phaser-2.3.0==
 
==Phaser-2.3.0==

Revision as of 09:14, 24 April 2012

Phaser is subject to licence conditions

Installation from source is required to call Phaser from Python

Phaser-2.5.0 Under Construction

Phenix Installation
Download with Phenix Package → Nightly Builds
Precompiled executables and source installations are available
CCP4 Installation
Download with Test release of ccp4 v6.3.0. It is tagged as 6.2.993 and the tarballs are available on the ftp server ftp.ccp4.ac.uk/ccp4/6.2.993.
Warning: Known Bugs in this version (4th April 2012)
Phubuntu
An Ubuntu Linux boot iso file is available from the Phenix website. Burn this file to a DVD and use it to boot your computer and run Phenix and Coot.
More information on Phubuntu
CCP4i
Windows
If you're installing under Windows, the ccp4i files are included in the installation wizard.
Linux/MacOS
The ccp4i files for phaser are included in the phaser source code distribution.

Phaser-2.3.0

  • Download with CCP4 6.2 Package → CCP4

Phaser-2.3.0 CCP4i

Windows
  • If you're installing under Windows, the ccp4i files are included in the installation wizard
Linux/MacOS
  • Download CCP4 interface for Phaser_MR Phaser_MR_3.tar.gz
  • Download CCP4 interface for Phaser_EP Phaser_EP_3.tar.gz
  • Download CCP4 interface for Phaser_NMA Phaser_NMA_3.tar.gz
  • To install new Phaser GUI
    1. Make sure you have write permission for the directory where ccp4 is installed
    2. Start the CCP4 GUI (by entering "ccp4i" at the command line)
    3. Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
    4. Select "Install Tasks"
    5. In the new window, in the "Task archive" box, enter <path-to>/Phaser_MR_3.tar.gz. Note that the file must be called Phaser_MR_3.tar.gz − Do not rename it
    6. The details of the Phaser gui installation will appear in the boxes
    7. Click "Apply" at the bottom of the window
    8. Click "Accept" in the prompt box
  • To uninstall previous Phaser GUI
    1. Make sure you have write permission for the directory where ccp4 is installed
    2. Start the CCP4 GUI (by entering "ccp4i" at the command line)
    3. Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
    4. Select "Install Tasks"
    5. In the top pulldown, Select Run the Installation Manager to "uninstall an existing task"
    6. In the new Choose Task to Uninstall folder, choose "Phaser". If there is no task called Phaser, you have not installed the ccp4i GUI for Phaser manually.
    7. The details of the Phaser gui installation will appear in the boxes
    8. Click "Apply" at the bottom of the window
    9. Click "Proceed" in the prompt box
    10. Exit ccp4i
  • New GUI will not rerun jobs with old GUI
    • Keyword input has changed. You cannot (reliably) rerun old phaser jobs in the new GUI (not backwardly compatible).