Difference between revisions of "Airlie J. McCoy"
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===2011=== | ===2011=== | ||
;Overview of the CCP4 suite and current developments | ;Overview of the CCP4 suite and current developments | ||
+ | :Winn MD, Ballard CC, Cowtan KD, Dodson EJ, Emsley P, Evans PR, Keegan RM, Krissinel EB, Leslie AG, <span style="color:darkmagenta">McCoy A</span>, McNicholas SJ, Murshudov GN, Pannu NS, Potterton EA, Powell HR, Read RJ, Vagin A, Wilson KS. | ||
:Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):235-242 | :Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):235-242 | ||
:[http://www.phaser.cimr.cam.ac.uk/images/e/e4/Dz5219.pdf '''download pdf'''] | :[http://www.phaser.cimr.cam.ac.uk/images/e/e4/Dz5219.pdf '''download pdf'''] |
Revision as of 10:09, 16 June 2011
Publications
2011
- Overview of the CCP4 suite and current developments
- Winn MD, Ballard CC, Cowtan KD, Dodson EJ, Emsley P, Evans PR, Keegan RM, Krissinel EB, Leslie AG, McCoy A, McNicholas SJ, Murshudov GN, Pannu NS, Potterton EA, Powell HR, Read RJ, Vagin A, Wilson KS.
- Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):235-242
- download pdf
- Using SAD data in Phaser
- Read RJ, McCoy AJ
- Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):338-344
- download pdf
2010
- A large-scale conformational change couples membrane recruitment to cargo binding in the AP2 clathrin adaptor complex.
- Jackson LP, Kelly BT, McCoy AJ, Gaffry T, James LC, Collins BM, Höning S, Evans PR, Owen DJ.
- Cell. 2010 Jun 25;141(7):1220-9.
- Cell (subscription required)
- Experimental phasing: best practice and pitfalls.
- McCoy AJ, Read RJ.
- Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):458-69. Epub 2010 Mar 24.
- download pdf
- PHENIX: a comprehensive Python-based system for macromolecular structure solution.
- Adams PD, Afonine PV, Bunkóczi G, Chen VB, Davis IW, Echols N, Headd JJ, Hung LW, Kapral GJ, Grosse-Kunstleve RW, McCoy AJ, Moriarty NW, Oeffner R, Read RJ, Richardson DC, Richardson JS, Terwilliger TC, Zwart PH.
- Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):213-21. Epub 2010 Jan 22.
- download pdf
2009
- Decision-making in structure solution using Bayesian estimates of map quality: the PHENIX AutoSol wizard
- Terwilliger TC, Adams PD, Read RJ, McCoy AJ , Moriarty NW, Grosse-Kunstleve RW, Afonine PV, Zwart PH, Hung LW.
- Acta Crystallogr D Biol Crystallogr. 2009 Jun;65(Pt 6):582-601
- download pdf
2008
- A structural explanation for the binding of endocytic dileucine motifs by the AP2 complex
- Kelly BT, McCoy AJ, Späte K, Miller SE, Evans PR, Höning S, Owen DJ.
- Nature. 2008 Dec 18;456(7224):976-79
- Nature (subscription required)
- An introduction to molecular replacement
- Evans P, McCoy A.
- Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):1-10. Epub 2007 Dec 5.
- download pdf
- Automated structure solution with the PHENIX suite
- Zwart PH, Afonine PV, Grosse-Kunstleve RW, Hung LW, Ioerger TR, McCoy AJ, McKee E, Moriarty NW, Read RJ, Sacchettini JC, Sauter NK, Storoni LC, Terwilliger TC, Adams PD.
- Methods Mol Biol. 2008;426:419-35.
- preview pdf doi Digital Object Identifier
2007
- A SNARE-adaptor interaction is a new mode of cargo recognition in clathrin-coated vesicles
- Miller SE, Collins BM, McCoy AJ, Robinson MS, Owen DJ.
- Nature. 2007 Nov 22;450(7169):570-4
- Nature (subscription required)
- High-resolution structure prediction and the crystallographic phase problem
- Qian B, Raman S, Das R, Bradley P, McCoy AJ, Read RJ, Baker D.
- Nature. 2007 Nov 8;450(7167):259-64. Epub 2007 Oct 14.
- Nature (subscription required)
- Solving structures of protein complexes by molecular replacement with Phaser
- McCoy AJ
- Acta Crystallogr D Biol Crystallogr. 2007 Jan;63(Pt 1):32-41. Epub 2006 Dec 13.
- download pdf
- Phaser crystallographic software
- McCoy AJ, Grosse-Kunstleve RW, Adams PD, Winn MD, Storoni LC and Read RJ.
- J. Appl. Cryst. (2007). 40, 658-674.
- download pdf
- β-Edge interactions in a pentadecameric human antibody Vκ domain.
- James LC, Jones PC, McCoy A, Tennent GA, Pepys MB, Famm K, Winter G.
- J Mol Biol. 2007 Mar 30;367(3):603-8. Epub 2006 Nov 3.
- doi Digital Object Identifier
2006
- Crystal structure of rab11 in complex with rab11 family interacting protein 2
- Jagoe WN, Lindsay AJ, Read RJ, McCoy AJ, McCaffrey MW, Khan AR.
- Structure. 2006 Aug;14(8):1273-83.
- Structure (subscription required)
2005
- Likelihood-enhanced fast translation functions
- McCoy AJ, Grosse-Kunstleve RW, Storoni LC, Read RJ.
- Acta Crystallogr D Biol Crystallogr. 2005 Apr;61(Pt 4):458-64. Epub 2005 Mar 24.
- download pdf
2004
- Liking Likelihood
- McCoy AJ
- Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2169-83. Epub 2004 Nov 26.
- download pdf
- Simple algorithm for a maximum-likelihood SAD function
- McCoy AJ, Storoni LC, Read RJ.
- Acta Crystallogr D Biol Crystallogr. 2004 Jul;60(Pt 7):1220-8. Epub 2004 Jun 22.
- download pdf
- Likelihood-enhanced fast rotation functions
- Storoni LC, McCoy AJ, Read RJ.
- Acta Crystallogr D Biol Crystallogr. 2004 Mar;60(Pt 3):432-8. Epub 2004 Feb 25.
- download pdf
2003
- Recent developments in the PHENIX software for automated crystallographic structure determination
- Adams PD, Gopal K, Grosse-Kunstleve RW, Hung LW, Ioerger TR, McCoy AJ, Moriarty NW, Pai RK, Read RJ, Romo TD, Sacchettini JC, Sauter NK, Storoni LC, Terwilliger TC.
- J Synchrotron Radiat. 2004 Jan 1;11(Pt 1):53-5. Epub 2003 Nov 28.
- download pdf
- Application of the complex multivariate normal distribution to crystallographic methods with insights into multiple isomorphous replacement phasing
- Pannu NS, McCoy AJ, Read RJ.
- Acta Crystallogr D Biol Crystallogr. 2003 Oct;59(Pt 10):1801-8. Epub 2003 Sep 19.
- download pdf
- Structure of β-antithrombin and the effect of glycosylation on antithrombin's heparin affinity and activity
- McCoy AJ, Pei XY, Skinner R, Abrahams JP, Carrell RW.
- J Mol Biol. 2003 Feb 21;326(3):823-33.
- doi Digital Object Identifier
2002
- New applications of maximum likelihood and Bayesian statistics in macromolecular crystallography
- McCoy AJ
- Curr Opin Struct Biol. 2002 Oct;12(5):670-3. Review.
- doi Digital Object Identifier
- PHENIX: building new software for automated crystallographic structure determination
- Adams PD, Grosse-Kunstleve RW, Hung LW, Ioerger TR, McCoy AJ, Moriarty NW, Read RJ, Sacchettini JC, Sauter NK, Terwilliger TC.
- Acta Crystallogr D Biol Crystallogr. 2002 Nov;58(Pt 11):1948-54. Epub 2002 Oct 21.
- download pdf
- Molecular architecture and functional model of the endocytic AP2 complex
- Collins BM, McCoy AJ, Kent HM, Evans PR, Owen DJ.
- Cell. 2002 May 17;109(4):523-35.
- Cell (subscription required)
2001
- No publications
2000
- ScFv multimers of the anti-neuraminidase antibody NC10: shortening of the linker in single-chain Fv fragment assembled in V(L) to V(H) orientation drives the formation of dimers, trimers, tetramers and higher molecular mass multimers
- Dolezal O, Pearce LA, Lawrence LJ, McCoy AJ, Hudson PJ, Kortt AA.
- Protein Eng. 2000 Aug;13(8):565-74.
- download pdf
- The conformational activation of antithrombin. A 2.85-A structure of a fluorescein derivative reveals an electrostatic link between the hinge and heparin binding regions.
- Huntington JA*, McCoy A*, Belzar KJ, Pei XY, Gettins PG, Carrell RW.
- *authors contributed equally
- J Biol Chem. 2000 May 19;275(20):15377-83
- download pdf
1999
- Structural basis for dimerization of the Dictyostelium gelation factor (ABP120) rod
- McCoy AJ, Fucini P, Noegel AA, Stewart M.
- Nat Struct Biol. 1999 Sep;6(9):836-41.
- Nature Structural Biology (subscription required)
- scFv multimers of the anti-neuraminidase antibody NC10: length of the linker between VH and VL domains dictates precisely the transition between diabodies and triabodies
- Atwell JL, Breheney KA, Lawrence LJ, McCoy AJ, Kortt AA, Hudson PJ.
- Protein Eng. 1999 Jul;12(7):597-604.
- download pdf
- Engineered mutants in the switch II loop of Ran define the contribution made by key residues to the interaction with nuclear transport factor 2 (NTF2) and the role of this interaction in nuclear protein import
- Kent HM, Moore MS, Quimby BB, Baker AM, McCoy AJ, Murphy GA, Corbett AH, Stewart M.
- J Mol Biol. 1999 Jun 11;289(3):565-77.
- doi Digital Object Identifier
1998
- The structure of the Q69L mutant of GDP-Ran shows a major conformational change in the switch II loop that accounts for its failure to bind nuclear transport factor 2 (NTF2)
- Stewart M, Kent HM, McCoy AJ.
- J Mol Biol. 1998 Dec 18;284(5):1517-27.
- doi Digital Object Identifier
- Three-dimensional structures of single-chain Fv-neuraminidase complexes
- Malby RL*, McCoy AJ*, Kortt AA, Hudson PJ, Colman PM.
- *authors contributed equally
- J Mol Biol. 1998 Jun 19;279(4):901-10.
- doi Digital Object Identifier
- Structural basis for molecular recognition between nuclear transport factor 2 (NTF2) and the GDP-bound form of the Ras-family GTPase Ran
- Stewart M, Kent HM, McCoy AJ.
- J Mol Biol. 1998 Apr 3;277(3):635-46.
- doi Digital Object Identifier
- Structural basis for amoeboid motility in nematode sperm
- Bullock TL, McCoy AJ, Kent HM, Roberts TM, Stewart M.
- Nat Struct Biol. 1998 Mar;5(3):184-9.
- Nature Structural Biology (subscription required)
1997
- Crystallization and preliminary X-Ray diffraction characterization of a dimerizing fragment of the rod domain of the Dictyostelium gelation factor (ABP-120)
- Fucini P, McCoy AJ, Gomez-Ortiz M, Schleicher M, Noegel AA, Stewart M.
- J Struct Biol. 1997 Nov;120(2):192-5
- doi Digital Object Identifier
- Nuclear protein import is decreased by engineered mutants of nuclear transport factor 2 (NTF2) that do not bind GDP-Ran
- Clarkson WD, Corbett AH, Paschal BM, Kent HM, McCoy AJ, Gerace L, Silver PA, Stewart M.
- J Mol Biol. 1997 Oct 10;272(5):716-30.
- doi Digital Object Identifier
- The 1.8 Å crystal structure of winged bean albumin 1, the major albumin from Psophocarpus tetragonolobus (L.) DC
- McCoy AJ, Kortt AA.
- J Mol Biol. 1997 Jun 27;269(5):881-91.
- doi Digital Object Identifier
- Electrostatic complementarity at protein/protein interfaces
- McCoy AJ, Chandana Epa V, Colman PM.
- J Mol Biol. 1997 May 2;268(2):570-84.
- doi Digital Object Identifier
- Single-chain Fv fragments of anti-neuraminidase antibody NC10 containing five- and ten-residue linkers form dimers and with zero-residue linker a trimer
- Kortt AA, Lah M, Oddie GW, Gruen CL, Burns JE, Pearce LA, Atwell JL, McCoy AJ, Howlett GJ, Metzger DW, Webster RG, Hudson PJ.
- Protein Eng. 1997 Apr;10(4):423-33.
- download pdf
1996
- Protein Structure and Interaction
- McCoy AJ
- Thesis (Ph. D)
- University of Melbourne Library (not available for loan)
Other Real McCoys
There are four other AJ McCoys publishing in biomedical science and cited in PubMed
Thus an author search for McCoy AJ in PubMed will lead to a combined publication list for all five of us. Only the publications listed above are this real McCoy's! |