Difference between revisions of "Downloads"

From Phaserwiki
(Phaser-2.4.0)
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<div style="margin-left: 25px; float: right;">__TOC__</div>
 
<div style="margin-left: 25px; float: right;">__TOC__</div>
Current release is '''Phaser-2.3''' → [[Phaser-2.3: Manual | Manual]]
 
  
==Executables==
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Phaser is subject to [[Licences | licence]] conditions
*Executables of the nightly builds are available at the [http://www.phenix-online.org Phenix] website. <span style="color:darkorange">''Warning: Under Construction''</span>
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Installation from source is required to call Phaser from Python
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=Phaser Releases=
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===Phaser-2.5.0 <span style="color:darkorange">''Under Construction''</span>===
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*Download with Phenix Package → [http://www.phenix-online.org/download/nightly_builds.cgi?admin=1| Nightly Builds]
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**Precompiled executables and source installations are available
  
==Phubuntu==
 
 
*An Ubuntu Linux boot iso file is available from the [http://www.phenix-online.org/download/ Phenix website]. Burn this file to a DVD and use it to boot your computer and run Phenix and Coot. [[Phenix-Ubuntu | More information on Phubuntu]]
 
*An Ubuntu Linux boot iso file is available from the [http://www.phenix-online.org/download/ Phenix website]. Burn this file to a DVD and use it to boot your computer and run Phenix and Coot. [[Phenix-Ubuntu | More information on Phubuntu]]
  
==Source Code==
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*Download with Test release of ccp4 v6.3.0. It is tagged as 6.2.993 and the tarballs are available on the ftp server ftp.ccp4.ac.uk/ccp4/6.2.993<span style="color:darkorange">''Warning: Known Bugs in this version (4th April 2012)''</span>
*Installation from source is required to call Phaser from Python
 
*To install the current Phaser from source, use the [http://www.phenix-online.org/downloads Phenix] distribution of Phaser (free to academics).
 
*Source installation of Phaser is also available through [http://www.ccp4.ac.uk CCP4]
 
  
 
==CCP4i==
 
==CCP4i==
 
If you're installing under Windows, the ccp4i files are included in the installation wizard.  
 
If you're installing under Windows, the ccp4i files are included in the installation wizard.  
  
===Phaser-2.5.0===
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The ccp4i files for phaser are included in the phaser source code distribution.
 
The ccp4i files for phaser are included in the phaser source code distribution.
  

Revision as of 23:08, 23 April 2012

Phaser is subject to licence conditions

Installation from source is required to call Phaser from Python

Phaser Releases

Phaser-2.5.0 Under Construction

  • Download with Phenix Package → Nightly Builds
    • Precompiled executables and source installations are available
  • Download with Test release of ccp4 v6.3.0. It is tagged as 6.2.993 and the tarballs are available on the ftp server ftp.ccp4.ac.uk/ccp4/6.2.993. Warning: Known Bugs in this version (4th April 2012)

CCP4i

If you're installing under Windows, the ccp4i files are included in the installation wizard.


The ccp4i files for phaser are included in the phaser source code distribution.

Phaser-2.3.0

To install the CCP4 GUI compatible with Phaser-2.3 under linux or Mac OSX:

To install new Phaser GUI

  1. Make sure you have write permission for the directory where ccp4 is installed
  2. Start the CCP4 GUI (by entering "ccp4i" at the command line)
  3. Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
  4. Select "Install Tasks"
  5. In the new window, in the "Task archive" box, enter <path-to>/Phaser_MR_3.tar.gz. Note that the file must be called Phaser_MR_3.tar.gz − Do not rename it
  6. The details of the Phaser gui installation will appear in the boxes
  7. Click "Apply" at the bottom of the window
  8. Click "Accept" in the prompt box

To uninstall previous Phaser GUI

  1. Make sure you have write permission for the directory where ccp4 is installed
  2. Start the CCP4 GUI (by entering "ccp4i" at the command line)
  3. Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
  4. Select "Install Tasks"
  5. In the top pulldown, Select Run the Installation Manager to "uninstall an existing task"
  6. In the new Choose Task to Uninstall folder, choose "Phaser". If there is no task called Phaser, you have not installed the ccp4i GUI for Phaser manually.
  7. The details of the Phaser gui installation will appear in the boxes
  8. Click "Apply" at the bottom of the window
  9. Click "Proceed" in the prompt box
  10. Exit ccp4i

New GUI will not rerun jobs with old GUI

Keyword input has changed. You cannot (reliably) rerun old phaser jobs in the new GUI (not backwardly compatible).