Difference between revisions of "Downloads"

From Phaserwiki
(→‎Phaser-2.5.0 Under Construction)
(→‎Phaser-2.3.0)
Line 22: Line 22:
  
 
==Phaser-2.3.0==
 
==Phaser-2.3.0==
−
*Download with CCP4 6.2 Package → [http://www.ccp4.ac.uk/download/ CCP4]
+
;CCP4 Installation
−
===Phaser-2.3.0 CCP4i===
+
:Download with CCP4 6.2 Package → [http://www.ccp4.ac.uk/download/ CCP4]
−
=====Windows=====
+
;CCP4i
−
*If you're installing under Windows, the ccp4i files are included in the installation wizard
+
*Windows
−
=====Linux/MacOS=====
+
::If you're installing under Windows, the ccp4i files are included in the installation wizard
−
* Download CCP4 interface for Phaser_MR [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_MR_3.tar.gz Phaser_MR_3.tar.gz]
+
*Linux/MacOS
−
* Download CCP4 interface for Phaser_EP [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_EP_3.tar.gz  Phaser_EP_3.tar.gz]
+
::Download CCP4 interface for Phaser_MR [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_MR_3.tar.gz Phaser_MR_3.tar.gz]
−
* Download CCP4 interface for Phaser_NMA [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_NMA_3.tar.gz  Phaser_NMA_3.tar.gz]
+
::Download CCP4 interface for Phaser_EP [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_EP_3.tar.gz  Phaser_EP_3.tar.gz]
−
*To install new Phaser GUI
+
;:Download CCP4 interface for Phaser_NMA [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_NMA_3.tar.gz  Phaser_NMA_3.tar.gz]
−
*# Make sure you have '''write permission''' for the directory where ccp4 is installed
+
:To install new Phaser GUI
−
*# Start the CCP4 GUI (by entering "ccp4i" at the command line)
+
:# Make sure you have '''write permission''' for the directory where ccp4 is installed
−
*# Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
+
:# Start the CCP4 GUI (by entering "ccp4i" at the command line)
−
*# Select "Install Tasks"
+
:# Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
−
*# In the new window, in the "Task archive" box, enter <path-to>/Phaser_MR_3.tar.gz.  Note that the file '''must''' be called Phaser_MR_3.tar.gz − '''Do not rename it'''
+
:# Select "Install Tasks"
−
*# The details of the Phaser gui installation will appear in the boxes
+
:# In the new window, in the "Task archive" box, enter <path-to>/Phaser_MR_3.tar.gz.  Note that the file '''must''' be called Phaser_MR_3.tar.gz − '''Do not rename it'''
−
*# Click "Apply" at the bottom of the window
+
:# The details of the Phaser gui installation will appear in the boxes
−
*# Click "Accept" in the prompt box
+
:# Click "Apply" at the bottom of the window
−
*To uninstall previous Phaser GUI
+
:# Click "Accept" in the prompt box
−
*# Make sure you have '''write permission''' for the directory where ccp4 is installed
+
:To uninstall previous Phaser GUI
−
*# Start the CCP4 GUI (by entering "ccp4i" at the command line)
+
:# Make sure you have '''write permission''' for the directory where ccp4 is installed
−
*# Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
+
:# Start the CCP4 GUI (by entering "ccp4i" at the command line)
−
*# Select "Install Tasks"
+
:# Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
−
*# In the top pulldown, Select '''Run the Installation Manager to''' "uninstall an existing task"
+
:# Select "Install Tasks"
−
*# In the new Choose Task to Uninstall folder, choose "Phaser". ''If there is no task called Phaser, you have not installed the ccp4i GUI for Phaser manually.''
+
:# In the top pulldown, Select '''Run the Installation Manager to''' "uninstall an existing task"
−
*# The details of the Phaser gui installation will appear in the boxes
+
:# In the new Choose Task to Uninstall folder, choose "Phaser". ''If there is no task called Phaser, you have not installed the ccp4i GUI for Phaser manually.''
−
*# Click "Apply" at the bottom of the window
+
:# The details of the Phaser gui installation will appear in the boxes
−
*# Click "Proceed" in the prompt box
+
:# Click "Apply" at the bottom of the window
−
*# Exit ccp4i
+
:# Click "Proceed" in the prompt box
−
*New GUI will not rerun jobs with old GUI
+
:# Exit ccp4i
−
**Keyword input has changed. You cannot (reliably) rerun old phaser jobs in the new GUI (not backwardly compatible).
+
:New GUI will not rerun jobs with old GUI
 +
::Keyword input has changed. You cannot (reliably) rerun old phaser jobs in the new GUI (not backwardly compatible).

Revision as of 10:18, 24 April 2012

Phaser is subject to licence conditions

Installation from source is required to call Phaser from Python

Phaser-2.5.0 Under Construction

Phenix Installation
Download with Phenix Package → Nightly Builds
Precompiled executables and source installations are available
CCP4 Installation
Download with Test release of ccp4 v6.3.0. It is tagged as 6.2.993 and the tarballs are available on the ftp server ftp.ccp4.ac.uk/ccp4/6.2.993.
Warning: Known Bugs in this version (4th April 2012)
Phubuntu
An Ubuntu Linux boot iso file is available from the Phenix website. Burn this file to a DVD and use it to boot your computer and run Phenix and Coot.
More information on Phubuntu
CCP4i
Windows
If you're installing under Windows, the ccp4i files are included in the installation wizard.
Linux/MacOS
The ccp4i files for phaser are included in the phaser source code distribution.

Phaser-2.3.0

CCP4 Installation
Download with CCP4 6.2 Package → CCP4
CCP4i
  • Windows
If you're installing under Windows, the ccp4i files are included in the installation wizard
  • Linux/MacOS
Download CCP4 interface for Phaser_MR Phaser_MR_3.tar.gz
Download CCP4 interface for Phaser_EP Phaser_EP_3.tar.gz
Download CCP4 interface for Phaser_NMA Phaser_NMA_3.tar.gz
To install new Phaser GUI
  1. Make sure you have write permission for the directory where ccp4 is installed
  2. Start the CCP4 GUI (by entering "ccp4i" at the command line)
  3. Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
  4. Select "Install Tasks"
  5. In the new window, in the "Task archive" box, enter <path-to>/Phaser_MR_3.tar.gz. Note that the file must be called Phaser_MR_3.tar.gz − Do not rename it
  6. The details of the Phaser gui installation will appear in the boxes
  7. Click "Apply" at the bottom of the window
  8. Click "Accept" in the prompt box
To uninstall previous Phaser GUI
  1. Make sure you have write permission for the directory where ccp4 is installed
  2. Start the CCP4 GUI (by entering "ccp4i" at the command line)
  3. Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
  4. Select "Install Tasks"
  5. In the top pulldown, Select Run the Installation Manager to "uninstall an existing task"
  6. In the new Choose Task to Uninstall folder, choose "Phaser". If there is no task called Phaser, you have not installed the ccp4i GUI for Phaser manually.
  7. The details of the Phaser gui installation will appear in the boxes
  8. Click "Apply" at the bottom of the window
  9. Click "Proceed" in the prompt box
  10. Exit ccp4i
New GUI will not rerun jobs with old GUI
Keyword input has changed. You cannot (reliably) rerun old phaser jobs in the new GUI (not backwardly compatible).
Retrieved from "https://www.phaser.cimr.cam.ac.uk/index.php?title=Downloads&oldid=1205"