Difference between revisions of "Downloads"

From Phaserwiki
(Phenix)
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==CCP4==
 
==CCP4==
===Current Releases===
+
;Downloads
;Phaser-2.5.0 <span style="color:darkorange">''Under Construction''</span>
+
*CCP4 [http://www.ccp4.ac.uk/download.php Release 6.3]
:Download with Test release of ccp4 v6.3.0. It is tagged as 6.2.993 and the tarballs are available on the ftp server ftp.ccp4.ac.uk/ccp4/6.2.993.
 
:<span style="color:darkorange">''Warning: Known Bugs in this version (4th April 2012)''</span>
 
;Phaser-2.3.0
 
:Download with CCP4 6.2 Package → [http://www.ccp4.ac.uk/download/ CCP4]
 
===Updating CCP4i===
 
;Phaser-2.5.0 <span style="color:darkorange">''Under Construction''</span>
 
:Link files distributed with source code to ccp4i directory
 
;Phaser-2.3.0
 
:Download CCP4 interfaces
 
:#Molecular Replacement [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_MR_3.tar.gz Phaser_MR_3.tar.gz]
 
:#Experimental Phasing [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_EP_3.tar.gz  Phaser_EP_3.tar.gz]
 
:#Normal Mode Analysis [http://www-structmed.cimr.cam.ac.uk/phaser/Phaser_NMA_3.tar.gz  Phaser_NMA_3.tar.gz]
 
:To install new Phaser GUI
 
:# Make sure you have '''write permission''' for the directory where ccp4 is installed
 
:# Start the CCP4 GUI (by entering "ccp4i" at the command line)
 
:# Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
 
:# Select "Install Tasks"
 
:# In the new window, in the "Task archive" box, enter <path-to>/Phaser_MR_3.tar.gz.  Note that the file '''must''' be called Phaser_MR_3.tar.gz − '''Do not rename it'''
 
:# The details of the Phaser gui installation will appear in the boxes
 
:# Click "Apply" at the bottom of the window
 
:# Click "Accept" in the prompt box
 
:To uninstall previous Phaser GUI
 
:# Make sure you have '''write permission''' for the directory where ccp4 is installed
 
:# Start the CCP4 GUI (by entering "ccp4i" at the command line)
 
:# Select the "System Administration" pull-down on the right-hand side of the CCP4 gui
 
:# Select "Install Tasks"
 
:# In the top pulldown, Select '''Run the Installation Manager to''' "uninstall an existing task"
 
:# In the new Choose Task to Uninstall folder, choose "Phaser". ''If there is no task called Phaser, you have not installed the ccp4i GUI for Phaser manually.''
 
:# The details of the Phaser gui installation will appear in the boxes
 
:# Click "Apply" at the bottom of the window
 
:# Click "Proceed" in the prompt box
 
:# Exit ccp4i
 
:New GUI will not rerun jobs with old GUI
 
::Keyword input has changed. You cannot (reliably) rerun old phaser jobs in the new GUI (not backwardly compatible).
 

Revision as of 23:16, 1 August 2012

Note that the use of Phaser is subject to licence conditions

Phenix

Installation of Phaser with Phenix allows a choice of installation methods
  • Precompiled executables for selected platforms
Linux and MacOS
Windows (limited functionality of other phenix components e.g. the phenix gui)
  • Source installations
  • Phubuntu
Phubuntu is an Ubuntu Linux boot iso file is available from Phenix
Burn this file to a DVD and use it to boot your computer and run Phenix and Coot
This method of installation is very useful for running tutorials/workshops with participants using their own laptops as it circumvents the problems associated participants having heterogeneous operating systems and different Phenix versions installed
More information on Phubuntu
Downloads

CCP4

Downloads