Difference between revisions of "Phaser-2.2: Manual"

From Phaserwiki
(Python)
(links to history urls)
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==Keywords==
 
==Keywords==
 
Phaser can be run using CCP4-style keyword input
 
Phaser can be run using CCP4-style keyword input
;[[ Keyword Modes |  Keyword Modes ]]
+
;[http://www.phaser.cimr.cam.ac.uk/index.php?title=Keyword_Modes&oldid=499 Keyword Modes]
 
: The different functions that Phaser can perform and the keywords relevant for each mode  
 
: The different functions that Phaser can perform and the keywords relevant for each mode  
;[[Keywords | Keywords]]
+
;[http://www.phaser.cimr.cam.ac.uk/index.php?title=Keywords&oldid=500 Keywords]
 
: Detailed descriptions of the keywords
 
: Detailed descriptions of the keywords
; [[Keyword Example Scripts | Keyword Example Scripts]]  
+
;[http://www.phaser.cimr.cam.ac.uk/index.php?title=Keyword_Example_Scripts&oldid=501 Keyword Example Scripts]
 
: Copy and edit to start using Phaser from keyword input
 
: Copy and edit to start using Phaser from keyword input
  
 
==Python==
 
==Python==
 
Phaser can be scripted using python.  
 
Phaser can be scripted using python.  
; [[Python Run-Jobs | Python Run-Jobs]]
+
;[http://www.phaser.cimr.cam.ac.uk/index.php?title=Python_Run-Jobs&oldid=503 Python Run-Jobs]
 
: How to run Phaser from python and the functions relevant for each Run-Job
 
: How to run Phaser from python and the functions relevant for each Run-Job
; [[Python Functions | Python Functions]]
+
;[http://www.phaser.cimr.cam.ac.uk/index.php?title=Python_Functions&oldid=504 Python Functions]
 
: Detailed descriptions of the functions  
 
: Detailed descriptions of the functions  
; [[Python Example Scripts | Python Example Scripts ]]
+
;[http://www.phaser.cimr.cam.ac.uk/index.php?title=Python_Example_Scripts&oldid=505 Python Example Scripts]
 
: Copy and edit to start using Phaser from python
 
: Copy and edit to start using Phaser from python
  
 
==XML==
 
==XML==
There is XML output available for developers writing automation scripts.<br> Please contact us for more information or XML output requests.
+
There is XML output available for developers writing automation scripts.<br>
; [[XML | XML]]
+
Please contact us for more information or XML output requests.
 +
;[http://www.phaser.cimr.cam.ac.uk/index.php?title=XML&oldid=506 XML]

Revision as of 16:36, 7 September 2009

This is the documentation for Phaser–2.2. There are some changes between this version and previous versions so input scripts may need editing.

Keywords

Phaser can be run using CCP4-style keyword input

Keyword Modes
The different functions that Phaser can perform and the keywords relevant for each mode
Keywords
Detailed descriptions of the keywords
Keyword Example Scripts
Copy and edit to start using Phaser from keyword input

Python

Phaser can be scripted using python.

Python Run-Jobs
How to run Phaser from python and the functions relevant for each Run-Job
Python Functions
Detailed descriptions of the functions
Python Example Scripts
Copy and edit to start using Phaser from python

XML

There is XML output available for developers writing automation scripts.
Please contact us for more information or XML output requests.

XML