Difference between revisions of "Phaser-2.3: Manual"

From Phaserwiki
(Keywords)
(Python)
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==Python==
 
==Python==
 
Phaser can be scripted using python.  
 
Phaser can be scripted using python.  
;[http://www.phaser.cimr.cam.ac.uk/index.php?title=Python_Run-Jobs&oldid=713 Python Run-Jobs]
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;{{Oldid|713|Python Run-Jobs}}
 
: How to run Phaser from python and the functions relevant for each Run-Job
 
: How to run Phaser from python and the functions relevant for each Run-Job
;[http://www.phaser.cimr.cam.ac.uk/index.php?title=Python_Functions&oldid=979 Python Functions]
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;{{Oldid|979|Python Functions}}
 
: Detailed descriptions of the functions  
 
: Detailed descriptions of the functions  
;[http://www.phaser.cimr.cam.ac.uk/index.php?title=Python_Example_Scripts&oldid=601 Python Example Scripts]
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;{{Oldid|601|Python Example Scripts}}
 
: Copy and edit to start using Phaser from python
 
: Copy and edit to start using Phaser from python
  

Revision as of 15:11, 27 June 2012

This is the documentation for Phaser–2.3. There are some changes between this version and previous versions so input scripts may need editing.

Keywords

Phaser can be run using CCP4-style keyword input

Keyword Modes
The different functions that Phaser can perform and the keywords relevant for each mode
Keywords
Detailed descriptions of the keywords
Keyword Example Scripts
Copy and edit to start using Phaser from keyword input

Python

Phaser can be scripted using python.

Python Run-Jobs
How to run Phaser from python and the functions relevant for each Run-Job
Python Functions
Detailed descriptions of the functions
Python Example Scripts
Copy and edit to start using Phaser from python

XML

There is XML output available for developers writing automation scripts.
Please contact us for more information or XML output requests.

XML