Difference between revisions of "Phaser-2.5.1: Manual"

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This is the documentation for Phaser&#8211;2.5. There are some changes between this version and previous versions so input scripts may need editing. '''Not all keywords will be valid for versions before the current (nightly) release of Phaser through Phenix.'''
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This is the documentation for Phaser&#8211;2.5.1. There are some changes between this version and previous versions so input scripts may need editing.  
  
;[[Keywords | Keywords]]
+
; {{Oldid|1464|Modes}}
 +
: The different functions that Phaser can perform and the keywords relevant for each mode
 +
; {{Oldid|1570|Keywords}}
 
: Detailed descriptions of the keywords
 
: Detailed descriptions of the keywords
 
;[[ Command Line Arguments |  Command Line Arguments ]]
 
: Phaser can be run using CCP4-style keyword input from a pre-compiled executable
 
: When run from the executable, phaser accepts some command line arguements
 
;[[ Keyword Modes |  Keyword Modes ]]
 
: The different functions that Phaser can perform and the keywords relevant for each mode
 
; [[Python Run-Jobs | Python Run-Jobs]]
 
: How to run Phaser from python and the functions relevant for each Run-Job
 
; [[XML | XML]]
 
:There is XML output available for developers writing automation scripts. If you require XML output, please contact[mailto:cimr-phaser@lists.cam.ac.uk phaser-help]
 
==Examples==
 
; [[Keyword Example Scripts | Keyword Example Scripts]]
 
: Copy and edit to start using Phaser from keyword input
 
; [[Python Example Scripts | Python Example Scripts ]]
 
: Copy and edit to start using Phaser from python
 

Latest revision as of 19:11, 13 January 2015

This is the documentation for Phaser–2.5.1. There are some changes between this version and previous versions so input scripts may need editing.

Modes
The different functions that Phaser can perform and the keywords relevant for each mode
Keywords
Detailed descriptions of the keywords