User contributions
From Phaserwiki
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- 08:38, 19 May 2015 (diff | hist) . . (+359) . . Molecular Replacement (→Has Phaser Solved It?: Clarify interpretation of RFZ.)
- 14:58, 14 May 2015 (diff | hist) . . (+174) . . Keywords (→link=PARTIAL: Clarify necessity to carry out MR before MR-SAD.)
- 16:23, 3 February 2015 (diff | hist) . . (+13) . . Keywords (→link=SOLPARAMETERS: Show MINSIGA in equation.)
- 16:18, 3 February 2015 (diff | hist) . . (-47) . . Keywords (→link=SOLPARAMETERS: Replace "s" by "1/d")
- 16:15, 3 February 2015 (diff | hist) . . (+131) . . Keywords (→link=SOLPARAMETERS: Add equation for solvent term for Sigma(A) curve)
- 20:44, 11 November 2014 (diff | hist) . . (+310) . . Molecular Replacement (→Translational Non-crystallographic Symmetry: Some modifications and clarifications)
- 10:48, 11 August 2014 (diff | hist) . . (+321) . . Keywords (→link=PURGE: Clarify interaction with PEAKS command.)
- 10:44, 11 August 2014 (diff | hist) . . (+258) . . Keywords (→link=PEAKS: Clarify that PURGE is usually the command to use.)
- 14:56, 3 June 2014 (diff | hist) . . (+7) . . Python Example Scripts (→Logfile Handling: Replace setLABI with setLABI_F_SIGF)
- 14:55, 3 June 2014 (diff | hist) . . (+7) . . Python Example Scripts (→Translational NCS Analysis: Replace setLABI with setLABI_F_SIGF)
- 14:55, 3 June 2014 (diff | hist) . . (+7) . . Python Example Scripts (→Cell Content Analysis: Replace setLABI with setLABI_F_SIGF)
- 14:54, 3 June 2014 (diff | hist) . . (+7) . . Python Example Scripts (→Anisotropy Correction: Replace setLABI with setLABI_F_SIGF)
- 14:53, 3 June 2014 (diff | hist) . . (+7) . . Python Example Scripts (→Automated Molecular Replacement: Replace setLABI with setLABI_F_SIGF)
- 14:53, 3 June 2014 (diff | hist) . . (+7) . . Python Example Scripts (→Reading MTZ Files for Molecular Replacement: Replace setLABI with setLABI_F_SIGF)
- 15:06, 29 May 2014 (diff | hist) . . (+53) . . Keywords (→link=BFACTOR: Correct definition of BFACTOR REFINE SIGMA, update default for SIGMA)
- 10:02, 28 May 2014 (diff | hist) . . (+1) . . Keywords (→link=MACTNCS: Correct syntax, with VRMS instead of VAR)
- 13:25, 23 April 2014 (diff | hist) . . (+158) . . Keywords (→link=ENSEMBLE: Provide guess for RMS for EM maps.)
- 19:14, 10 April 2014 (diff | hist) . . (+772) . . SAD using CCP4i (Add step to carry on building from very incomplete initial model)
- 13:18, 9 December 2013 (diff | hist) . . (-214) . . Molecular Replacement (→"rlist" Files: Remove discussion of degenerate translation search, which is no longer supported.)
- 13:17, 9 December 2013 (diff | hist) . . (-447) . . Molecular Replacement (→"sol" Files: Remove discussion of degenerate 3DIM and 5DIM cases, no longer supported.)
- 13:14, 9 December 2013 (diff | hist) . . (-133) . . Molecular Replacement (→How to Define Solutions: Remove mention of degenerate translation functions, which are no longer supported.)
- 13:12, 9 December 2013 (diff | hist) . . (-542) . . Keyword Example Scripts (→Brute Translation Function: Remove script for degenerate translation function, which is no longer supported.)
- 13:11, 9 December 2013 (diff | hist) . . (-309) . . Keyword Example Scripts (→"rlist" Files: Remove discussion of degenerate translation search, which is no longer supported.)
- 13:09, 9 December 2013 (diff | hist) . . (-365) . . Keyword Example Scripts (→"sol" Files: Remove discussion of degenerate 3DIM and 5DIM cases, no longer supported.)
- 11:54, 4 December 2013 (diff | hist) . . (+26) . . FAQ (Mention st9bad_alloc so that people with out of memory problems will find this web page.)
- 12:26, 2 December 2013 (diff | hist) . . (+194) . . FAQ (Add suggestion to cut final refinement resolution to reduce memory usage if necessary.)
- 16:54, 21 October 2013 (diff | hist) . . (-2) . . m Publications (→Primary Citations: Format LERF citation like the rest (authors after title))
- 16:52, 21 October 2013 (diff | hist) . . (+634) . . Publications (→Primary Citations: Add CCP4 Study Weekend 2013 papers)
- 08:40, 8 October 2013 (diff | hist) . . (+170) . . Molecular Replacement (→What to do in Difficult Cases: Note that brute rotation function can now be used within automated pipeline)
- 08:36, 8 October 2013 (diff | hist) . . (+443) . . FAQ (Update discussion of negative LLG to mention VRMS refinement.)
- 09:11, 22 August 2013 (diff | hist) . . (+4) . . Keywords (→link=SOLPARAMETERS: Add "USE" subkey to default definition for BULK)
- 11:40, 5 August 2013 (diff | hist) . . (+126) . . Keywords (→link=RFACTOR: Note that this test also applies to judging success in MR_ATOM)
- 11:38, 5 August 2013 (diff | hist) . . (+19) . . Keywords (→link=SOLUTION: Mention Euler angle convention here.)
- 11:37, 5 August 2013 (diff | hist) . . (+218) . . Molecular Replacement (→Annotation: Add explanation of Euler angle convention.)
- 10:21, 4 August 2013 (diff | hist) . . (-2) . . Keywords (→link=RFACTOR: Change RESHARP to RFACTOR to RFACTOR description)
- 13:59, 28 June 2013 (diff | hist) . . (0) . . Keywords (→link=TRANSLATE: Footnotes didn't correspond to superscripts)
- 13:55, 28 June 2013 (diff | hist) . . (+2) . . m Keywords (→link=TRANSLATE: add spaces)
- 13:54, 28 June 2013 (diff | hist) . . (+7) . . Keywords (→link=ROTATE: Need VOLUME subkey in ROTATE AROUND option)
- 14:36, 25 June 2013 (diff | hist) . . (-135) . . FAQ (Update advice on memory consumption)
- 22:51, 11 April 2013 (diff | hist) . . (+7) . . m SAD using CCP4i (formatting)
- 22:25, 11 April 2013 (diff | hist) . . (+84) . . SAD using CCP4i (A few more changes to match the current SAD pipeline.)
- 17:03, 10 April 2013 (diff | hist) . . (+726) . . SAD using CCP4i (Update to describe Phaser pipeline instead of old standalone Phaser-EP GUI)
- 17:58, 19 January 2013 (diff | hist) . . (+62) . . Publications (→Primary Citations: Add link to tNCS statistics PDF)
- 17:57, 19 January 2013 (diff | hist) . . (+149) . . Publications (→Primary Citations: Add tNCS statistics paper (add link once file is uploaded))
- 20:15, 23 November 2012 (diff | hist) . . (-2) . . MR using CCP4i:BETA/BLIP (Update for current version of Phaser) (current)
- 20:10, 23 November 2012 (diff | hist) . . (+794) . . Combined MR-SAD using CCP4i (Bring up to date with CCP4 6.3, using Parrot instead of DM and ARP/wARP Classic instead of Expert System)
- 10:48, 8 November 2012 (diff | hist) . . (+399) . . Molecular Replacement (→Has Phaser Solved It?: Add a paragraph about finding a single PDB file.)
- 10:43, 8 November 2012 (diff | hist) . . (+546) . . Molecular Replacement (→Has Phaser Solved It?: Update, clarify.)
- 12:03, 10 October 2012 (diff | hist) . . (-1) . . m Keywords (→link=MACTNCS: Correct subkey "VRMS" to "VAR")
- 11:30, 28 August 2012 (diff | hist) . . (+24) . . m Molecular Replacement (→What Resolution of Data Should be Used?: minor clarification)
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