Difference between revisions of "Tutorials"

From Phaserwiki
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;Phenix Tutorials
 
 
:Movies of the phenix GUI in action
 
 
:*[[beta-blip-mr | TEM-1 beta-blip (β-lactamase/β-lactamase inihibitor)]]
 
:*[[b-CA-mr | b-CA-mr (β-carbonic anhydrase)]]
 
 
 
;Data
 
 
:The coordinate (pdb), sequence (fasta) and reflection (mtz) files required to run the tutorials are distributed with Phaser.
 
:They can also be obtained from:
 
:[[Image:Download.png|link=]] [http://www-structmed.cimr.cam.ac.uk/phaser/tutorial/phaser-mr-tutorial.tar.gz  Data for Molecular Replacement Examples and Tutorials]
 
:[[Image:Download.png|link=]] [http://www-structmed.cimr.cam.ac.uk/phaser/tutorial/phaser-ep-tutorial.tar.gz  Data for Experimental Phasing Examples and Tutorials]
 
 
 
;Tutorials
 
;Tutorials
 
:The tutorials are suitable for individual use or class teaching.
 
:The tutorials are suitable for individual use or class teaching.
Line 23: Line 8:
 
:* [[Combined MR-SAD using CCP4i|Combined MR-SAD using CCP4i]]
 
:* [[Combined MR-SAD using CCP4i|Combined MR-SAD using CCP4i]]
 
:* [[EP using Phenix|EP using Phenix]]
 
:* [[EP using Phenix|EP using Phenix]]
 +
 +
;Data
 +
:The coordinate (pdb), sequence (fasta) and reflection (mtz) files required to run the tutorials are distributed with Phaser.
 +
:They can also be obtained from:
 +
:[[Image:Download.png|link=]] [http://www-structmed.cimr.cam.ac.uk/phaser/tutorial/phaser-mr-tutorial.tar.gz  Data for Molecular Replacement Examples and Tutorials]
 +
:[[Image:Download.png|link=]] [http://www-structmed.cimr.cam.ac.uk/phaser/tutorial/phaser-ep-tutorial.tar.gz  Data for Experimental Phasing Examples and Tutorials]
 +
 +
;Phenix Tutorials
 +
:Movies of the phenix GUI in action
 +
:*[[beta-blip-mr | TEM-1 beta-blip (β-lactamase/β-lactamase inihibitor)]]
 +
:*[[b-CA-mr | b-CA-mr (β-carbonic anhydrase)]]
  
 
;References
 
;References
 
: The crystal structure of a hetero-dimer of beta-lactamase (BETA) and beta-lactamase inhibitor protein (BLIP), both with molecular replacement models from crystal structures of the individual BETA and BLIP components. We thank Mike James and Natalie Strynadka for the diffraction data. Reference: Strynadka, N.C.J., Jensen, S.E., Alzari, P.M. & James. M.N.G. (1996) ''Nat. Struct. Biol.'' '''3''' 290-297.
 
: The crystal structure of a hetero-dimer of beta-lactamase (BETA) and beta-lactamase inhibitor protein (BLIP), both with molecular replacement models from crystal structures of the individual BETA and BLIP components. We thank Mike James and Natalie Strynadka for the diffraction data. Reference: Strynadka, N.C.J., Jensen, S.E., Alzari, P.M. & James. M.N.G. (1996) ''Nat. Struct. Biol.'' '''3''' 290-297.
 
: The crystal structure of insulin phased on intrinsic sulphurs. We thank Paul Adams for the diffraction data. Reference: Adams (2001) ''Acta Cryst'' D'''57'''. 990-995.
 
: The crystal structure of insulin phased on intrinsic sulphurs. We thank Paul Adams for the diffraction data. Reference: Adams (2001) ''Acta Cryst'' D'''57'''. 990-995.

Revision as of 23:29, 1 August 2012

Tutorials
The tutorials are suitable for individual use or class teaching.
Data
The coordinate (pdb), sequence (fasta) and reflection (mtz) files required to run the tutorials are distributed with Phaser.
They can also be obtained from:
Download.png Data for Molecular Replacement Examples and Tutorials
Download.png Data for Experimental Phasing Examples and Tutorials
Phenix Tutorials
Movies of the phenix GUI in action
References
The crystal structure of a hetero-dimer of beta-lactamase (BETA) and beta-lactamase inhibitor protein (BLIP), both with molecular replacement models from crystal structures of the individual BETA and BLIP components. We thank Mike James and Natalie Strynadka for the diffraction data. Reference: Strynadka, N.C.J., Jensen, S.E., Alzari, P.M. & James. M.N.G. (1996) Nat. Struct. Biol. 3 290-297.
The crystal structure of insulin phased on intrinsic sulphurs. We thank Paul Adams for the diffraction data. Reference: Adams (2001) Acta Cryst D57. 990-995.