Difference between revisions of "Tutorials"

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The tutorials can be used for class teaching.
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;Data
  
* [[MR using CCP4i:TOXD|MR using CCP4i:TOXD]]
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:The coordinate (pdb), sequence (fasta) and reflection (mtz) files required to run the tutorials are distributed with Phaser.
* [[MR using CCP4i:BETA/BLIP|MR using CCP4i:BETA/BLIP]]
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:They can also be obtained from:
* [[MR using keyword input|MR using keyword input]]
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:[[Image:Download.png]] [http://www-structmed.cimr.cam.ac.uk/phaser/tutorial/phaser-mr-tutorial.tar.gz  Data for Molecular Replacement Examples and Tutorials]
* [[Finding a search model:TOXD|Finding a search model:TOXD]]
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:[[Image:Download.png]] [http://www-structmed.cimr.cam.ac.uk/phaser/tutorial/phaser-ep-tutorial.tar.gz  Data for Experimental Phasing Examples and Tutorials]
* [[SAD using CCP4i|SAD using CCP4i]]
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* [[Combined MR-SAD using CCP4i|Combined MR-SAD using CCP4i]]
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;Tutorials
:[[Image:Download.png]] [[Data for Tutorials]]
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:The tutorials are suitable for individual use or class teaching.
 +
:* [[MR using CCP4i:TOXD|MR using CCP4i:TOXD]]
 +
:* [[MR using CCP4i:BETA/BLIP|MR using CCP4i:BETA/BLIP]]
 +
:* [[MR using keyword input|MR using keyword input]]
 +
:* [[Finding a search model:TOXD|Finding a search model:TOXD]]
 +
:* [[SAD using CCP4i|SAD using CCP4i]]
 +
:* [[Combined MR-SAD using CCP4i|Combined MR-SAD using CCP4i]]
 +
 
 +
;References
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: The crystal structure of a hetero-dimer of beta-lactamase (BETA) and beta-lactamase inhibitor protein (BLIP), both with molecular replacement models from crystal structures of the individual BETA and BLIP components. We thank Mike James and Natalie Strynadka for the diffraction data. Reference: Strynadka, N.C.J., Jensen, S.E., Alzari, P.M. & James. M.N.G. (1996) ''Nat. Struct. Biol.'' '''3''' 290-297.
 +
: The crystal structure of insulin phased on intrinsic sulphurs. We thank Paul Adams for the diffraction data. Reference: Adams (2001) ''Acta Cryst'' D'''57'''. 990-995.

Revision as of 13:22, 30 June 2009

Data
The coordinate (pdb), sequence (fasta) and reflection (mtz) files required to run the tutorials are distributed with Phaser.
They can also be obtained from:
Download.png Data for Molecular Replacement Examples and Tutorials
Download.png Data for Experimental Phasing Examples and Tutorials
Tutorials
The tutorials are suitable for individual use or class teaching.
References
The crystal structure of a hetero-dimer of beta-lactamase (BETA) and beta-lactamase inhibitor protein (BLIP), both with molecular replacement models from crystal structures of the individual BETA and BLIP components. We thank Mike James and Natalie Strynadka for the diffraction data. Reference: Strynadka, N.C.J., Jensen, S.E., Alzari, P.M. & James. M.N.G. (1996) Nat. Struct. Biol. 3 290-297.
The crystal structure of insulin phased on intrinsic sulphurs. We thank Paul Adams for the diffraction data. Reference: Adams (2001) Acta Cryst D57. 990-995.