Difference between revisions of "Course"
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| − | The Macromolecular Crystallography course was presented in the 1999-2000 academic year to staff and students of CIMR, University of Cambridge and the MRC-LMB. | + | The Macromolecular Crystallography course was presented in the 1999-2000 academic year to staff and students of Cambridge Institute for Medical Research (CIMR), University of Cambridge and the Medical Research Council Laboratory of Molecular Biology, Cambridge (MRC-LMB). |
| + | |||
| + | {| class="wikitable" | ||
| + | |- | ||
| + | ! colspan="3" | <b>Lecture Topics</b> | ||
| + | |- | ||
| + | | colspan="3" | <br /><b>Basic concepts and practical aspects</b> | ||
| + | |- | ||
| + | | [http://www.phaser.cimr.cam.ac.uk/Course/Overview/Overview.html Overview of X-ray crystallography] | ||
| + | | Randy Read | ||
| + | | 9 November 1999 | ||
| + | |- | ||
| + | | [https://www.phaser.cimr.cam.ac.uk/Course/Crystals/intro.html Crystallisation: theory and practice] | ||
| + | | Airlie McCoy | ||
| + | | 16 November 1999 | ||
| + | |- | ||
| + | | [https://www.phaser.cimr.cam.ac.uk/Course/Basic_diffraction/Diffraction.html Basic diffraction theory: waves, interference, reciprocal space] | ||
| + | | Randy Read | ||
| + | | 23 November 1999 | ||
| + | |- | ||
| + | | [https://www.phaser.cimr.cam.ac.uk/Course/Basic_collection/Datacol.html X-ray data collection: indexing, strategy, processing] | ||
| + | | Andrew Leslie | ||
| + | | 30 November 1999 | ||
| + | |- | ||
| + | | [https://www.phaser.cimr.cam.ac.uk/Course/Basic_phasing/Phasing.html The phase problem: introduction to phasing methods] | ||
| + | | Randy Read | ||
| + | | 7 December 1999 | ||
| + | |- | ||
| + | | [https://www.phaser.cimr.cam.ac.uk/Course/Basic_refinement/Refinement.html Introduction to fitting, refinement and validation] | ||
| + | | Randy Read | ||
| + | | 14 December 1999 | ||
| + | |- | ||
| + | | colspan="3" | <br /><b>Advanced topics</b> | ||
| + | |- | ||
| + | | [https://www.phaser.cimr.cam.ac.uk/Course/Adv_diff1/Diffraction.html Advanced diffraction: waves, interference and complex numbers] | ||
| + | | Randy Read | ||
| + | | 18 January 2000 | ||
| + | |- | ||
| + | | [https://www.phaser.cimr.cam.ac.uk/Course/Adv_diff2/Diffraction2.html Advanced diffraction:atoms, crystals and reciprocal space] | ||
| + | | Randy Read | ||
| + | | 25 January 2000 | ||
| + | |- | ||
| + | | X-ray sources: from generators to synchrotrons | ||
| + | | Gwyndaf Evans | ||
| + | | 8 February 2000 | ||
| + | |- | ||
| + | | Data collection, processing, complications | ||
| + | | Andrew Leslie | ||
| + | | 15 February 2000 | ||
| + | |- | ||
| + | | [https://www.phaser.cimr.cam.ac.uk/Course/Fourier/Fourier.html Fourier transforms: structure factors, phases and electron density] | ||
| + | | Randy Read | ||
| + | | 22 February 2000 | ||
| + | |-] | ||
| + | | [https://www.phaser.cimr.cam.ac.uk/Course/Convolution/convolution.html The convolution theorem and its applications] | ||
| + | | Randy Read | ||
| + | | 29 February 2000 | ||
| + | |- | ||
| + | | Symmetry in real and reciprocal space | ||
| + | | Anne Bloomer | ||
| + | | 7 March 2000 | ||
| + | |- | ||
| + | | The Patterson function and its implications | ||
| + | | Phil Evans | ||
| + | | 28 March 2000 | ||
| + | |- | ||
| + | | [https://www.phaser.cimr.cam.ac.uk/Course/Statistics/statistics.html Structure factor statistics: Wilson statistics, SIGMAA...] | ||
| + | | Randy Read | ||
| + | | 4 April 2000 | ||
| + | |- | ||
| + | | [https://www.phaser.cimr.cam.ac.uk/Course/Likelihood/likelihood.html Maximum likelihood: theory, and application to structure refinement] | ||
| + | | Randy Read | ||
| + | | 11 April 2000 | ||
| + | |- | ||
| + | | [https://www.phaser.cimr.cam.ac.uk/Course/MolRep/molrep.html Molecular replacement] | ||
| + | | Randy Read | ||
| + | | 18 April 2000 | ||
| + | |- | ||
| + | | Isomorphous replacement | ||
| + | | Randy Read | ||
| + | | 25 April 2000 | ||
| + | |- | ||
| + | | [https://www.phaser.cimr.cam.ac.uk/Course/Adv_phasing/Expphasing.html Experimental phasing by maximum likelihood] | ||
| + | | Randy Read | ||
| + | | not presented | ||
| + | |- | ||
| + | | Anomalous scattering and MAD | ||
| + | | Gwyndaf Evans | ||
| + | | 2 May 2000 | ||
| + | |- | ||
| + | | [https://www.phaser.cimr.cam.ac.uk/Course/DenMod/index.htm Density modification: theory and practice] | ||
| + | | Randy Read | ||
| + | | 9 May 2000 | ||
| + | |- | ||
| + | | [https://www.phaser.cimr.cam.ac.uk/Course/Fitting/fittingtalk.html Fitting, refinement and validation] | ||
| + | | Phil Evans | ||
| + | | 16 May 2000 | ||
| + | |- | ||
| + | | Analysing protein structures | ||
| + | | Arthur Lesk | ||
| + | | 23 May 2000 | ||
| + | |} | ||
Latest revision as of 12:00, 16 October 2023
The Macromolecular Crystallography course was presented in the 1999-2000 academic year to staff and students of Cambridge Institute for Medical Research (CIMR), University of Cambridge and the Medical Research Council Laboratory of Molecular Biology, Cambridge (MRC-LMB).
| Lecture Topics | ||
|---|---|---|
Basic concepts and practical aspects | ||
| Overview of X-ray crystallography | Randy Read | 9 November 1999 |
| Crystallisation: theory and practice | Airlie McCoy | 16 November 1999 |
| Basic diffraction theory: waves, interference, reciprocal space | Randy Read | 23 November 1999 |
| X-ray data collection: indexing, strategy, processing | Andrew Leslie | 30 November 1999 |
| The phase problem: introduction to phasing methods | Randy Read | 7 December 1999 |
| Introduction to fitting, refinement and validation | Randy Read | 14 December 1999 |
Advanced topics | ||
| Advanced diffraction: waves, interference and complex numbers | Randy Read | 18 January 2000 |
| Advanced diffraction:atoms, crystals and reciprocal space | Randy Read | 25 January 2000 |
| X-ray sources: from generators to synchrotrons | Gwyndaf Evans | 8 February 2000 |
| Data collection, processing, complications | Andrew Leslie | 15 February 2000 |
| Fourier transforms: structure factors, phases and electron density | Randy Read | 22 February 2000 |
| The convolution theorem and its applications | Randy Read | 29 February 2000 |
| Symmetry in real and reciprocal space | Anne Bloomer | 7 March 2000 |
| The Patterson function and its implications | Phil Evans | 28 March 2000 |
| Structure factor statistics: Wilson statistics, SIGMAA... | Randy Read | 4 April 2000 |
| Maximum likelihood: theory, and application to structure refinement | Randy Read | 11 April 2000 |
| Molecular replacement | Randy Read | 18 April 2000 |
| Isomorphous replacement | Randy Read | 25 April 2000 |
| Experimental phasing by maximum likelihood | Randy Read | not presented |
| Anomalous scattering and MAD | Gwyndaf Evans | 2 May 2000 |
| Density modification: theory and practice | Randy Read | 9 May 2000 |
| Fitting, refinement and validation | Phil Evans | 16 May 2000 |
| Analysing protein structures | Arthur Lesk | 23 May 2000 |